YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46109448, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPQRRENSS PRRHLGESSS GTASPADTRQ QPAQTESAVS PITYGENLPE NFQPADTMRP  60
   61 RTEGYGSISG PAGSSAQQSK ETSQERGLVR PAQPSRPSRG TERMRSATRL RKPPMPRRPS 120
  121 SNTPYRGGVF SADDEVHEVE ADAAVRQQSY RRRPGLPTQL SRVQSRPDDE DDNDRSDQPT 180
  181 ETPTETPQED EEETPLEEHD DSDSDVSEAE SFTLKDRQQA INQTHPFGIR VWKPALYKKD 240
  241 RSIQKFAQAD IHSAPGGRVN NWLLTFNLLW TLLFGWWLAT LAALGAIVCL LFAAAPSGRE 300
  301 YGRVLWGLAG YMFYPFGKFV RLEKDETYMH EDQDEGRSIS EYEQWQSGDI EHGRLFFGPD 360
  361 SEHNRSIVGR SRRSIDSEPS ETESLLGRGR RGEHVDTDLS HQHKRRLFGR GEWNVGRVIF 420
  421 FVFFYCLISP SLLFVSAICW FLVFWIPMGK TTFLLFDHLR RHPLALSFES DIRYIREDGG 480
  481 PSSSVLLCTY RAVGSRYWKY TVDGTNIFLI NLMVVVIFVI FDWLVIEGVF HVEGFITSPA 540
  541 FLFCAGLLSI IPLAYFIGQA VASISAQSSM GVGAAINAFF ATVVEVFLYC VALSQGKGQL 600
  601 VEGSIVGSIF AGILFLPGIS MCFGAIKRKT QRFNARSAGV TSTMLLFAIV GAFGPTLFYQ 660
  661 IYGTHELNCM DCEDYNTGEN GRDCRRCYFS QAPSLSDRFY LEAVRPYCYM AATTLFFSYL 720
  721 IGLWFTLRTH AAVIWNVEVD EKRHEDHMHS SSMRTSQVHG HAHSHTHNPT TAETSGADVR 780
  781 DSQLYKRILG QSLKQSGFGE ELSRQNSTTG QSVGANGSAS TLHVVPPKSS GGEPSHSALH 840
  841 VPGLSEADNK MLVREVAEIA ATAATIASRE RMTRKPSAVP ANHGAAARPT PSRQHTHNDV 900
  901 AETEGPATEA HQAHGGHDAP NWSRAKSSII LLGATVLYAI IAEILVDTVD VVLESFAIDQ 960
  961 KFLGITLFAL VPNTTEFLNA ISFAMNGNIA LSMEIGSAYA LQVCLLQIPA LVFYSAFWPG1020
 1021 VPEGGDPALY TFSLLFPQWD LVMTILCVFL LSYMYGEGKS NYFKGSILML TYLVVIIGYY1080
 1081 FSGFTSDTMG MQRFDVMGAD GNYQSYKTIG RSTRGVAFPA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle