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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46109966, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTLGHGSS QLGSHMLRSS FYTHGRYATC GSPSASRHML QALTKSRCLA RPSASSIRTF  60
   61 ASNSGKRPRF SQRLGEAMRN SKIQWYQIPV GLGVGFLGLV QFYKVSSREK ERIEMEDGQE 120
  121 GTRTPKKRAR IRPDGPWQVQ VMSTLPLKAI SRLWGRFNEL TIPYYLRWQI HANELSLDEV 180
  181 AEPDLHVYPN LASFFYRTLK PGARPLDQDP HTLVCPSDGK VLQYGQIQGG DIEQVKGMTY 240
  241 SIDALLGKNT PPASVSGTSG TSTPATSLAS NDVSDEEALV KQDAEFAQVN GISYTLPDLL 300
  301 SGTGKRGPSV KDESMPASPG TVSEVSAELA LGERPWYDVV SPDKTTALYY AVIYLAPGDY 360
  361 HRFHSPTNWV VDRRRHFAGE LYSVSPYLQR TLPGLFTLNE RVVLLGRWRW GFFSYVPVGA 420
  421 TNVGSIVVNF DKELRTNSLL TDTAADRAAE EAANRGEVYQ GFAEATYEAA SPILRGHALR 480
  481 RGEEMGGFQL GSTIVLVFEA PANKVGENNQ HIGWDWAVEK GQQVKMGQAL GRVVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle