YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46109928, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRIVRTAA QLAGAALFTF LVIAFLDRNY RVLPNSIHGY MPSHHPGLIV TDVTIVTCSS  60
   61 VNPFSSCELN KEWHRVDKDL YLGRTWTTSA YLYVMRKHEE DLTEEDRVVV DVSVGRLQPQ 120
  121 PKGETDDAWE SRSSGIWIKR SAKRKASDSK QAVTDIDVLF GDDAVEARDG YALTGTPLLL 180
  181 NTGGNLLCVQ LTVRRGPVRE AKKPTPRIRN DGRYKIMQIG DLHLSTGVGA CREAVPDSYN 240
  241 GGKCEADPRT LDFVNRVLDD EKPDLVVLSG DQVNGDTAPD APTAMFKIVS LLIERKIPYA 300
  301 AIFGNHDDEK TMSREAQMAI MESLPFSLST AGPADIDGVG NYYVEVLARG KTDHSALTIY 360
  361 LMDTHAYTPD ERNFPGYDWV KPNQIEWFKK TAAGLKKNHN EYTGRHMDIA FIHIPLTEYA 420
  421 DPALPRVGEW KEGVTAPVYN SGFRDALVEQ GIVMVSAGHD HCNDYCSLSL AGEGETKIPA 480
  481 LWMCYAGGSG FGGYAGYGGY HRRVRLFEVD TNEARIKTWK RLESGDTASR IDLQIIVDGG 540
  541 KPQPIAPVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle