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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42544379, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDHEDSSSI PRSGYDTPVP ELDDHRHQSV STRVERPRRG TFDSLYGARQ LEPEPSSPPA  60
   61 IRVRDFEEAI IDEETGDASP TARRSRRPTV DSTDRSISPP NSVKAFAQAR RRERDMSFSE 120
  121 PNKPDMEDVA SRAMSVSSKR SHRSKPHTVI DNDAVSFSTN KTAEEDVCFP VKESYHKDHL 180
  181 YIDFDYLENF INEQAAERAA ERAAERNAAA AAAAAKKSFE DMRAQQNESR LQRMVTVDGD 240
  241 ILEPVSDDSM TREKTNQTVG SHNEDVVAEK QPVPIDPNRF SFFSSAWEST IHAADFGDLV 300
  301 LPGEDLRGLF ELPDEEEDGV WWLNVNAATK EEVQSICKSF GIHPLTIEDI ITQEAREKIE 360
  361 LFPSYYFACF RSFSVVEEDD GIEYEPFNTY VIVFREGTLS FSFEPNSHAA QVRRRITALK 420
  421 DYVSLSSDWI CYALIDDIVD SFGPVIRQLE LEADAIEDEV FVMREDDSNS FLRRIGRIRR 480
  481 NCLALYRLLG GKADVLRGFT KRCNENYKVT PRMDIGMYLG DIQDHVVTMA TNLGHFEKIL 540
  541 SRAHSNYLAT VSIKSIEQGT HTNEVLSKIT MLASVLVPLN LVSGVFGMNV PVPFATVAAT 600
  601 NLAPFFSIIG FMIFMCCVFM ALARWKRYI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle