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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42549808, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTRESSRPP RSHRPKDRDR ERDRDRDRDR DRRRDGQRKR KSRSRQPASG SEDTRDRSSR  60
   61 TLSSHALADL ERENARQKKR SERASRDYRD ESRRPERRRD EHRRKDRDPD KPRTHGKNKK 120
  121 KRVVSGAVME EGQSKAPLRG GGGSVDTIQQ EKDFYFSKPP KKKKKKLWIA IGVGAVVLLI 180
  181 IIVVAVVVSQ KKKDGGDGGG SSNSDSSDDT TDTSDLDGKD RSKIPEKWQN TYLDPWTWKS 240
  241 TTDFNVTFTD EMVGDLPIMG LYDEWDDSAQ ANENVPPLNK PWGSYGKKPA RGVCIGGWLY 300
  301 LEPFISPSLF NYDSKQGIID EWTLSEKLGS EAGKTLEKHY ASFITEQTFK DIQAAGLDHV 360
  361 RIGFNYWAVE VYDGDPYVYR TSWRYLLRAI EWCRKYGLRV NLDLHGIPGS QNGWNHSGRW 420
  421 GSIGWLNGKD GSKNAERALE IHERLSKFFA QPRYKNIITH YGLANEPRMT SLKTSDVIKW 480
  481 TEDAYKIVRK NGVKALVVFG DGFMGLENWQ GLMTGYDDMV LDVHQYVIFN ENQIDYTHKE 540
  541 KVEYACDGWT EQAEISMDRS TGYGPTIFAE WSQADTDCAK FLTGVGWGTR WEGTYDTGNK 600
  601 DSSILEPRCP TKDSKCSCRG ANADPSDWSD EYKKFLKMFA EAQMHSFEKG WGWWYWTWKT 660
  661 EDNHQWSYES GLKAGVLPDK PWSRDFNCDK DVPDFEKMGL PEYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle