YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46128483, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYLEKQAN AFRGTLSSAA TKISNPSTNK AASLAVPSSL APSSPSPSAA SDPNTPTTKR  60
   61 KRDAAPDVPY SQPQLTGYGA EVKTQMTFAV EYLKKKGDTK TITEIIDHLS LRGYDEEHKR 120
  121 QLAEGLRGHP RVDWKPDANL SEQTWKTGTY AHRPIIPGVK NATTLLGHLQ AKTDASGVSV 180
  181 KDLKDGWPDC EDTISALERE YKILVVRTKK DNLPRYVWPN DASLHYKVQP EFQSMWQRVQ 240
  241 LPPIDEMHRK LTSVGQKPTS EDPRKTKDGQ GNKPKVQKRR KGNRIGKATN VHMAHLMQDY 300
  301 SGMRR

Type	Start	End	Confidence
Signal Peptide	1	50	0.92
N-region	1	41
H-region	42	47
C-region	48	50
Cleavage Site	50	51
Non-Cytoplasmic	51	305	0.99