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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46128435, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTTSADGH LAAPDDSQHL SATQRSRWAT QRKSVNSSNN KRNSILDRMG HKKTGSNEKN  60
   61 PPSDGSDPAG DDGQSPEANP DNEDEDEEHE NRTLYFNQPL PTELLDENGA PSQTYTRNKI 120
  121 RTAKYTPISF VPKNLWFQFH NVANIFFLFL VILVIFPIFG GVNPGLNAVP LIFIIAVTAI 180
  181 KDAIEDYRRT VLDIELNNAP VHRLRNWNNV NVLEGDVSTW RQFKKANSKF FGSIWRATQS 240
  241 IWSKKAKEER AKRKAVSTEE DGPRASVETQ RTRQSMRQSI ASPFTGRESF MSAREDIQMT 300
  301 PVPSPSPQAT PHARFEMPDE QDAKRATALM QMKPDVINYH HPASGARFQK DTWKSLNVGD 360
  361 FVRIYNDEEL PADVIILSTS DPDGACYVET KNLDGETNLK VRQAVRCGRS LKHARDCERA 420
  421 EFVVESEGPQ PNLYKYNGAI KWKQSVPGYL DDEPEDMTEP ITIDNLLLRG CNLRNTEWIV 480
  481 GVVIYTGHDT KIMMNAGITP SKRARIAREM NFNVVCNFGI LLIMCLLAAI INGVAWAKTD 540
  541 ASLHFFDFGS IGGKPAMSGF ITFWAAIILF QNLVPISLYI TLEIVRTLQA IFIYNDVEMY 600
  601 YEPIDQPCIP KSWNISDDVG QIEYIFSDKT GTLTQNVMEF KKATINGQPY GEAYTEAQAG 660
  661 MQKRLGIDVE KEGERVRAEI ADAKVRALAG LRNIHDNPFL HDESLTFIAP DFVSDLAGES 720
  721 GPDQKEANEF FMLALALCHT VMAEKVDGDI PQMIFKAQSP DEEALVATAR DMGFTVLGSS 780
  781 GEGINLNVMG EDRHYQILNT IEFNSSRKRM SSIVRMPDGR IILFCKGADS IIYSRLKRGE 840
  841 QKELRKTTAE HLEMFAREGL RTLCIAWKEV TEHDYRVWKK EHDAAASALE EREEKLETVA 900
  901 ELIEQDLYLV GGTAIEDRLQ DGVPDTIALL GNAGIKLWVL TGDKVETAIN IGFSCNLLNN 960
  961 DMELIHLKVD EDESGEITDE AFFEMAEKLL DDNLQIFGIT GSDHDLALAK KNHEPPAPTH1020
 1021 GLVIDGFTLR WVLNDRLKQK FLLLCKQCKS VLCCRVSPAQ KAAVVAMVKN GLDVMTLSIG1080
 1081 DGANDVAMIQ EADVGVGIAG VEGRQAAMSS DYAIAQFRFL SRLVLVHGRW SYRRLAESIS1140
 1141 NFFYKNMVWT FSIFWYEIYC DMDMTYLFDY TYILMFNLFF TSIPVAIMGV LDQDVSDKVS1200
 1201 LAVPQLYRRG IERLEWTQLK FWLYMIDGIY QSIMVFFIPY LLFMPGTFLT GNGLGLEDRL1260
 1261 RFGTYVAHPA VITINMYILI NTYRWDWLMV LIVVISDVFI FFWTGVYTSF TSSQYFYGTA1320
 1321 AQVYGEATFW ACFFLVPVIC LFPRFAIKAL QKVYWPYDVD IIREQERMGN FAYLDKTDET1380
 1381 NDPPTADTKS DKSKSSKSSR RSKKMPKHVA YGSVDEDLRP IYPPSTATRA TTYNQHSQNG1440
 1441 SDSTNYTAHR ISLDVPMQGR PSIDRARPSY DRMRASMDRV RPSFEASNDF TSAARLSRIE1500
 1501 SSQSQTGRFH PRLRGLSLTK SANI

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