YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42549611, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRNILPLW LLWLTQGQVS ALPQVDQDSS NSQNDEVIGD IQTSAFEYPT TYAKEDIIPV  60
   61 TETVKVSTSK VGTTATAQVL PSLSDVEPHT EGFIVTDLYN PFFTKPAVLS TSIPSPTSLL 120
  121 KPVKTTTKNA EPSGLSKMAA AADIFASPID TGAPLSMFAR KDTHPVSKDA VKQNSPIGTN 180
  181 KFYSNFYLED QNTPVYTYPY SLTWAKGTGP SASWGMSISH IDADKRTYGP VGANGAVEFY 240
  241 TNPVSIQPMV ISAKELGKNT VLTMDSISPH FAKAYLRKDS KSAATITFPL YQGSVFTTAY 300
  301 FSGGTPWIQS GVYFRTMTQV TKDPKTNVRK YNFVLEDGTT WRLYAYKTKG DPLTLQVTNN 360
  361 GLAVSQKPFY GHIQIAKDPK VGQSEQVLDN GCGIYATGMT ISGNNVGTQG TYKFTWTKAG 420
  421 HATGKLWIFA LPHHISSFDA ATTKEMRTYS MQTLTKGVAK AVGGNSWTMI EPSLPVNMGF 480
  481 APWDPVKGSR GLSANAKKII APIAKSEVSQ DMDAQSNTDS MYFSGKALAK FGSVVYVINN 540
  541 MLGDTALAQA GLEKLKTAFA RFGSNKQKFP LVYESVWGGI VSTASYVSGS AGSDFGNTYY 600
  601 NDHHFHFGYH VLTAAYIGSM DSKWLAANKA YVNTLVRDYA NPSSSDKYFP QWRSFDWYHG 660
  661 HSWAHGLTPM WDGKDQESSS EDMMSVYAMK MWGTVIKDTN MVARANLQLA VMSRAMQAYY 720
  721 YYTTTNTVQP KNFIGNKVAG ILFENKVHHT TWFSADIEAV QGIHMIPILP FSNLARTGTF 780
  781 VQQEWETYFN KGRVDKFNNL WKGIIYGNYA TIQPNAAWSF FTQSKFDPIW IDGGASRTWY 840
  841 MAYAAALGSI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle