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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46128661, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.64
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPGTPLTL LLFAAFALLL LAVISTPIIE AIPLSDFGGV TYGVFGYCQN GKGCSGIGVG  60
   61 YDTAKLAGDN SQAFDLPSGV RNTLSAILIV HPVAALITLV MTIMAAVSHL HGPSHSTRYL 120
  121 LILFIFLFID FLVCLLAFLI DVLLFVPHLA WGSYLVLAAT ILVAMSGLVT CAMRRTLVSR 180
  181 KDRQRRIADN AEMSGQNYYN RTAQDKTAAE DGITRQPTLP TQPVGNSVHD NIPAFATFDQ 240
  241 KNRSDQISEE VPLTRRATSN RSPGVPHEPV NVGEAAAFNR TPQRQGSQDQ FGNPIDNGID 300
  301 PYAGRRGPSP SMSNRGRGNG GYRGGRGGYG RGGYDNYGAP MRGRGGYGTP GRGGYGPRGG 360
  361 RGGSGPPGRG AYGPGGMRGG PGPSGHSNGP YDRRPSPGQN YASDFQPSEP SNGYSSTNPS 420
  421 MPSLNTYTAY RPESELPRAE SPPPLPGTEP ATIGGRPVEM DASPAVHGHQ GGNYGQLRDS 480
  481 DVDVAGMVGL QQGQIPQRND TIMSEGSKYS NDEQYAPPRA AWNQGDGRNS PKAPPPLATS 540
  541 HPLGRNTPPV TQQPAVMGNS NYYEDVDPRF APEASLSNNN LQPPPIEPIY EDVHANNAGA 600
  601 RSPAESEHST FTSISQRGIN PRWNPGPPPP MPYQQGPPHR RPVHQQQQQR QDMLLDTPDF 660
  661 QLPSSRSGRG PGMVPGSAYP PGGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle