YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42549474, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLTEVEDE HFQHGQAGPD VEEDDEDYSD TDSEISNESD YDPSDETLAE RLYALRDIVP  60
   61 PTTRSWISGK ASTVSNAAWS VLSFSGKGAW VITTSALFFG VPFALSFAED QQLTAMEQEY 120
  121 NMRQSGSDLL TAGSEQSTAD QVGAALEGKP AQPSL

Type	Start	End	Confidence
Cytoplasmic	1	87	0.70
Transmembrane Helix	88	108	0.72
Non-Cytoplasmic	109	155	0.87