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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42549259, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFTRRRIAD ISSYTPTTTL KSRAEAAHGD AGTTPNYHSS LDGVNQPMNM LFKDALWWTL  60
   61 GIMALIVLWI RIIEILWARL RHVSAMNVPG HKQQYWKISQ WTWMPSLKKN IIYAPLWNKR 120
  121 HNREFRLSSA ISMGTLPSRL HFTILFIYLG SNFAYMFVLN WANENKFAFC AELRGRSGTL 180
  181 ALVNMVPLII FAGRNNPLIA WLKISFDTYN LLHRWMGRIV VLETIIHTVA WLIAAVDDIG 240
  241 WDGAGRQITG ILFYGSGAVG TVAMTLLALL SVSPVRHAFY ETFLNVHIIL AFVAFVATWA 300
  301 HCASSTLPGG LPQLPWIMAI MAIWFCDRLS RMFRLLSVNW STKGWTEAVC EAMPGNVTRV 360
  361 TLHLPRYKDI EPGTHAYLRI WGVSAWESHP FSICWTNHVR DSSLPIAEKE SSNTVDKSTM 420
  421 TTSVSFLIAA QTGFTKKLYD RASHYPSGLR AKAAMEGPYA GHHSLDSYGH AVLFAGSTGI 480
  481 THQVSYIRHL LEGHNQGTTA TRRITLVWII REYESLEWVR PYMDTILRIP NRKDVLRIQI 540
  541 FVTRPQNPRD IVSASATVRM FPGRPNVPLI LEREVQEQMG AMCVTVCGPG ALADDVRGAA 600
  601 RAVQARPWWP SSLIHGIRVQ PNMPARRQDS DQESQSRSPS SAPRGAQSHR SLTMRERESS 660
  661 RSVSGSKRKR ADTQNGETTN HRRRTAEPSH ESNDDNSDNV YDPDQPPEER REVQQGFRNL 720
  721 LREVTENTEE YLQADSRGIY DTILRANELS KKVRQTTEAT IDSRLLVSTT DLSYRKTLRL 780
  781 TQGSLSQGVD VDEFVSKCIT YMRHGGGIID DNAPELSSTQ RQRRITTRGD ENGDDDIGDD 840
  841 GDMMNWPHLG RFSALPCIRR PALPGFLLGP LSVEKKARKI AKRSAPFRPN SLTETRPEVL 900
  901 NVEDLAHKEN DLTAICGKIL HQLQNIQVHL QQTVSDSIDD DMDDEERTRI MHQYGLRSTG 960
  961 GIDLMRFVVN PKSFGQTIEN MFYVSFLIRD GRVEIEFDES DLPALAPVNK DEVEDDDDPT1020
 1021 RHGAAKHQAI LSMDMETWQD IIDTFGLREP MITHRKDVTN SGPGARGWYS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle