YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46129425, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVRFTRAA TRATAQLRAP AQRRFASTQN EFIKERQHIK EHAAGTTELW KKISLYGVAP  60
   61 CLIAAGANAY WLWSEHWEHW SHMPPLEERT EYPYQNIRTK NYQWGNGDKT LFWNDEVNYH 120
  121 NKDKTS

Type	Start	End	Confidence
Cytoplasmic	1	52	0.79
Transmembrane Helix	53	73	0.84
Non-Cytoplasmic	74	126	0.90