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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46115976, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDTTETKNG AKRARLPTSD PKYPRKRSLK ACHDHSQFDP ASLEILRQLG HIISTQNELT  60
   61 HTVRSIAASQ SHVALGPGAS QDQLQFNGSL NSDTTVQLQH QLHTADWFTA QSESASTTPA 120
  121 SSASAAAVRW FGILSNEAPN EEFLEAETLQ GDLLDTSPEG RADSDITPLQ RATRAIDTQP 180
  181 EISDRRNSRT SNISEESLWQ ASKSISLLDQ EQGLFQNFLH RICSWLDLFD PARTFSTRVP 240
  241 HLAVRNAGLL NAILALSSYH RSLDDSIPSN QRPDQNIALQ YYYQTLHYVQ KAMRYSTYQN 300
  301 SHELMATTLM VSTYEMLRGS RQDWQQHLQG VFRILRSRQI EVETSSLEST TWWAWLRQDI 360
  361 WVAFREKRRT YSTWMPKKGY AELDNHELAS RAVWIMAQVI NFCAVDSSIE MEGGLSRRID 420
  421 WAKALKNMLN EWQSHLTVEF SALPSMGQYG IEVFKPHLIH PQCFGLAVQL HHCSWILITA 480
  481 HEPHLDGIQG LLKRQKDIQQ SIDMVCGIGM TLTEDASSML SSQCLFIADV PREQCFIQML 540
  541 GVSTTCMSAA AHFDALMTIH GMFKRIVRND AIRVDPPEIY NWRVIALTAS ACFAGALFGV 600
  601 DAGIIGGVLA MPDFQREFGL NNRSDQARAD LAGNLVTTMQ AGAIGGALLS SPFADRKGRK 660
  661 PALLLVAITG FIGGIMQAFS YGHLSAFYIG RFIEGLGLGA GTMLAPTYVS ENSPRAIRGF 720
  721 LVGFFQLLLV LGGMTAYFIN YGSLLHLPGK ATWMVPLGCQ SICPALLFIS MIFCPESPRW 780
  781 LASRDQWEKA GAVLSDVRKL PVDHAYIQQE LLELKTQIDQ EKAVMQDTGF WALQKECWTL 840
  841 PWNRKRALLT VGIVTLGQWT GTGAINYYAP TIFKDLGLSS TTTALFAQGI YGVVKVVTCL 900
  901 IFIFFLADSL GRRKSFMIGG AIQAFCMFFI GFYLRFGPEP GENDHPPPAG IAALAMVYIF 960
  961 AAAFNMSWGP VSWIYVSEIP TNRLRAYNVA LASFTHWVHN LAVSKSTPVM LLHDPYRAYF1020
 1021 IFGSFNFCMA VVAYWIPETK GISLERMDEV FGIADFSKVE DVGIAASRAK RIDDENVEDV1080
 1081 QTDRPVKS

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