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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46115876, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTQDQSQD YFSKPTTPST PGQAHLGNVA NRIPSTIPDR ESGTERAKST HSRHRVLHGL  60
   61 PSTFMSYMSR RPVASSRGFS RVSSEGTASR PTAPQHSSHF HHYAPAEDGY YQENPWFGEA 120
  121 DKKPIFSLGK PLPHKVRRKV LKPVRPDGKV DEEMAIVKEE TTNEPHPGYA SRTTSGQPYR 180
  181 VETQSSLPSR DIQRQQSRTT AAGVAHNDRR NDAGQPVFEY IPGEATPTPG HRDPASRVQS 240
  241 KQDNGHSPPD FKVDGEPLGH QEKPCVESGD TNANEMRNWW ARLRARHPEP LAEFLATAVA 300
  301 IFLGLTGTLS VNLSATQSQP YGTYETSCWA WGFAWMFGIY LGGGVSGAHM NPAISVSLSI 360
  361 FRGFPWRQCV IYVFVQFIAS IVAGALAYAM YADSINHVDP DMTKMSMTFF STPREWVTLK 420
  421 SAFFNQVVGS AIMMIAVFAL GDDQNNPPGA GMHALVLGFL VTTLKFTLGY NIGSALNPAS 480
  481 DFGPRVIAYA VGFRGDNVFH SGWWFYGPWA ATLIGSLLGC TLYDGFVFVG SESPVNFRVD 540
  541 KRVKKLFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle