YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46130690, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRMRGAST PLVGLDAAVS ISSRSSSSPF LRTFSTTPCR EKMSKGRARM FEWLNHGGGR  60
   61 SLAEAGTSPN YLGPHQDQPF PLNPLFRSQT VLSDQTREII YDKVIGKGEL LKAVSAEMHI 120
  121 DVRRVAAVVR LKEVEKQWKA EGKQLAVPYA RAVMKMLPKT FWEEGAENVP HEPINEIHVH 180
  181 NLTMQQLFTP VSESRHFTRE DAAKAFHDRM LSADKRSPQR ELIKMEKQVI KGVPRPEALT 240
  241 KFQELIQKHE TKDSEKEADK RRFLDSMTKR VKTDRYEFRF KPMDINEVGR DGRSRKGTGW 300
  301 RYGAPFEDRK RGLVKIPTSV P

Type	Start	End	Confidence
Signal Peptide	1	25	0.82
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	321	0.99