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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46116672, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTWTRFKS LFGSPNGTSR REWLHEEERA LLSHHRNQDI SSATPPEEVM KVCLRLRHLI  60
   61 RECVPCELEE SAITRSHSTV ITNKVVQAAR EAGGQKYRAC VVYALLVNMK WFKREATFEL 120
  121 WDADLHALRA TACTVVAKQI IEGEEDLEYL LHHVLLRRYS FLIDKIPTPP TNVIEKAVDL 180
  181 HAVRVIGSSG YQKCISYLWR GWLVQDEDDP SEFVDYKNKA NPNFIVHMDP DRMRAPRYQN 240
  241 AAQLLFSVIY LGLYTAAVNS ANPSGVLDGA EIALYIFTFA YVCDECLKFY KAGANIVGFW 300
  301 NVFNFILYTF LTASLVLRII GQVYWDNDAV FKKYNELSYN LLSFVAPMFW SRLLLYFDSF 360
  361 RFFGAMLVVL KVMMKESLIF FALLIVVIIG FLQAFIGLDI ADDNILGDTY FIIESMLKAI 420
  421 MQSPEFDGFE NFGHPFGLIL YYCFTFVVMI ILLNILIALY NSAYEGIYEN ADDEYLALFA 480
  481 QKTMQFVRAP DENVYIAPFN LVEIVVSGLL EWWMPKPTYE FINDCVMAIL YSPLLFVAAW 540
  541 FEKRDARKIR SNRSRGEEDD DLIHEWEQFH GDLDMEAEGW TKTCETAKPN VEDEPAVIEV 600
  601 RKLRAEMEEL KSMLSQLGKT TAKGSDDNTI TGSNAGKAPD TGDDVQEVSE TTETADVLDT 660
  661 SDTPEVESTS GDNKSGKKGK KKNNKKKDGS SN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle