YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42547893, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSTRFQAR ALRQLISKQP SRSISTSAAK SLLITPSTQL TAKSLTTFNS STPRSASFAT  60
   61 SAEATAEPVN TNFAAVSTGG IPYPGIPNIE DPYKKRQWQL EHMAGAFRVF ARMGFTEGAA 120
  121 GHISVRDPVD RNTFWINPMG VHFGMLKASD MVHINEDGQV IGGNRVAVNA AGFTIHSAIH 180
  181 KARPDVDAAC HAHSKYGKAW STFGKPLDMI SQDACIFYKD HSVYSDFGGV VFEDDEGARI 240
  241 AQALGPKNRS VILQNHGLLT AGGTVDEAAY LFSLMERTCE VQLLVESTGL PRNTISDEAA 300
  301 EYTYRYNADP NTLYTEFQPD FEYEVWKSNG ELQSGVN

Type	Start	End	Confidence
Signal Peptide	1	42	0.70
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	337	0.99