YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42547796, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSQQVGRSG RIAAQSFRRF ARSTQSRGYA TGAASAAAGS AFKRAAGMLV AGVGASTAGG  60
   61 VGTWYTMHSN GMGFHSDEES LRRFVANHEE AKMVEETINN HPLIAELRAN PELTESRPHM 120
  121 KMPASYRSRS LTGGALIGEG KVTVPPYAWV APEGKQLVSV AYVGEDLCGH PGIVHGGFLA 180
  181 TMLDEGLGRC SFGALPHNIA VTANLNVDYR KPTPAGSFLV LRAETYKVEG RKAWVRGHIE 240
  241 LLANPGEKPT ILAEADALFI SPKYAASERV TDINKKTMSV SD

Type	Start	End	Confidence
Cytoplasmic	1	44	0.57
Transmembrane Helix	45	66	0.62
Non-Cytoplasmic	67	282	0.82