YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42547754, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDYVSESDS DYTSYWRDWF ISSRGNEYFC EIDEDYLTDR FNLTGLNTEV QYYQYALDLV  60
   61 TDVFDLECDD EMREAIEKSA RHLYGLVHAR YIVTTRGLSK MLDKYKKAEF GKCPRVMCHS 120
  121 HPLLPMGLSD VPNLKPVKLY CARCEDIYNP KSSRHAAIDG AYFGTSFHNI LFQVYPALIP 180
  181 TKSVDRYVPR VYGFKVHASA ALIRWQSSKR DEMRRRLRKL EIDTGFRDEM EDEEEDDDEE 240
  241 LEFEGIDGRM AVVEGLYALS VQLTGRGSPA GWISIISQGV TILLLSFLLV RFWIGVWRQV 300
  301 NVGQNWQGWY KPQMGEIVFS

Type	Start	End	Confidence
Non-Cytoplasmic	1	269	0.68
Transmembrane Helix	270	294	0.84
Cytoplasmic	295	320	0.66