YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42547742, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTRRIVATE KTFLDKDDPI DETSSTAPAV PSQVIYKLLA FTFAMVFIPI GSYFLTVNTV  60
   61 FNGKSLHTFL CNSSFAGGLA AVLANVVLIG YIIVAMKEDQ SDQLKAENKK DK

Type	Start	End	Confidence
Cytoplasmic	1	33	0.92
Transmembrane Helix	34	57	0.87
Non-Cytoplasmic	58	73	0.81
Transmembrane Helix	74	95	0.92
Cytoplasmic	96	112	0.91