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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42547455, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRFMLGFW VLAFLGTASN ATLLGKRDAQ TQPIEIVIGS STQYDTLIST FLVRTDATYT  60
   61 ATTPVYGHGE ANTTYNIPFS DSRGLSCGTV MVESHVTILS STDRIISAPE TTTLPTENPC 120
  121 DIVTVIVRMQ GYKKGDTNAP LSQDPTLALS PPETEISTVS QDGSAVSSDP GSPIDYTTIT 180
  181 STGTDTGTST ITKAPSGSSP GTVIVVVPSP SFPYVTVTSY DRSITAAVTS TIPPTGPGET 240
  241 GTVVIYDPYE WETTTSYDDA ASSDYTTTMW PSASDHTGTV VIHMADKWVT VSSYDQTITA 300
  301 ASTKTISPSS PDQTGTVVVY QPDPWVTFTS YRSDTAASTN TIYPTGPGAT GTVIVYQGYQ 360
  361 WTTVTSFGEY TAASTSTISP STPGQSGTVV VFRPQPYTTI TSYGSVSTDA TYTSPPPSPG 420
  421 QTGVVLVVAK QPYTTITSYG GVTAESTTTI VPSTPGQTGT VIVFDPQYYV TTTRYGSVTV 480
  481 ATTRTASGDG SSRTLTVVVD LPQPYTTVTS YGTFTAASTR TYPPSAAGQT GTIEVDLPQS 540
  541 YTTVTSYGAF TAPSTRTYPP SIAGQPGTVE VDLPQPYTTV TSYGTFTAAN TRTYPPSVAG 600
  601 QTGTVEVDLP QSYTTVTSYG RPQPYTTVTS YGSFAAASTT TMAPASQGGT GTVIVDLPQS 660
  661 YTTTTTWGSF STTGTTTLSP ASQGGVATVV VKRPQSYTTT TSWGTYAAAS TTTMAPANQG 720
  721 DPGTVVVNLP QSYTTTTTWG SFSSSGTTTI SPTSPGGVAT VVMQKPQPYT TVTSYTSTVS 780
  781 IQSTSTGTPA SAGQTATVVV VAPPVGTKAA DQSCNNGGLE YAIYTNSYYN ADPPNYSSLN 840
  841 VAYFGTATPT YTGITNSIGI TEPGGVKAGN SGPAQAIYPG SPSQTWQYKA VNHRAFLYAP 900
  901 INGTYSVVVP YSDEVTLVWY GNKALSTWTR ANADLEQDFS SGPSTSKTLK MQLTAGTYTP 960
  961 FRVFWANAQG DYSMIVTVTA PDGTVIVNDS GSSSKYFVRF ACDSSTPTYP AFGRGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle