YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42547301, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSRSLLRL LRSLGASSTP TLCRPCIRTI ASTANAQAAV SNESSKTPKN LKPLTQEQRD  60
   61 YLDSALRVNQ AGELAAVLIY AAQSPILVRS KPHLRKLMAH MYDQEDGHFK TFNGLIHKHR 120
  121 VRPTAMYPLW SVMATGLGWS TAMMGYKAAM ACTEAVETEI GGHYNEQIRT LLEMVSQWEA 180
  181 EGYDVGEELS NLVKTLRVIR DEELEHLDHA VEHDAQKAEP HWLLTGVIRA GCRGAIWTYG 240
  241 WHLLWNVYTE DQRIEGNPVC YKTIVPI

Type	Start	End	Confidence
Signal Peptide	1	23	0.93
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	267	0.95