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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42546940, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHAPRASQL SGSTAYTGSS ASLSSLATAT TITPTNGGPV HATANIINQK ADASRSLYQI  60
   61 CISLKQRLAQ VPGFGPYLDE LDPTDPVDPL WNLFRSGYPL LLIYNALRPN EELKVDDSSS 120
  121 ANEAKKSKIA IFKFVQACMK ELEIPSTQSF VITDLMGTDT SGFVKVTQVV NYVLDRAEER 180
  181 GYLMQAQPDV ESNEPTGGQM TYRDHIIREL VDTERKYVQD LENLHDLKKT LEQQGEIPGD 240
  241 TLHQIFFNIN AILDFQRRFL IRVETTNSMP ALNQRWGAPF VHYEDALIDI YQPFIANQRK 300
  301 AAQVANQVFD KIQRSSHPVA ADYNTLDGFL LKPMQRLVKY PLLLKDLNKK TEDDEVKMDL 360
  361 TTGCEAAERV LSKANEAVNR DLLDEAVEDL TSRVEDWKSH KVEQFGKLLL HGVYGVITGK 420
  421 TDQEKDYEIY LFESILLCCK EISSSKSKDK KDKLRSGGPK ARNKSAKLQL KGRIFMTNVT 480
  481 DIVSFTKPGS HSVQIWWKGD PGVENFIIKF LNEETLKKWV NTLETQRKHN VPRQSTNSDT 540
  541 LSTDFAWTRD QVAGLENPYL KENDDEDDED IGPATAPAGF PGVTHPMSLG PRTASSNNLR 600
  601 ARAGTGESSA SLAGMVRAPP PRFPLPAPPG SLSLQTQPNG AHSPSAWAGD SYFSPVTESP 660
  661 ASTRTSTTSG MFSTPQYGFP KSATPNPQQW EDANGNRYTA PAMPRAPSRD GPSPNPARNP 720
  721 RGPSLPAMSS SSQAALAAQQ RNRSYSTPDI NGPGMPRTRQ PSHGNIPAVP GIPQHLHPGH 780
  781 NPNLSRDQTG SPRNDQPTRA QTNSPGAQRE RMHKPTGSVG GSMNHFPAQP VHPRSITPGG 840
  841 GNQILRVDAA AANSRTVSPA LGTATMPPPS ANPLSPEIPL PTQLKVRVNC ESGNYVTLVV 900
  901 AFNITYQSLV DRIDAKLARF TTSSISKSML KLRYRDEDGD YVAIEGDDDI QIAFMEWREG 960
  961 VRNMYSGGVG EIELFCVGDT A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle