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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46105492, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIDDYLEE GFDPRSVTVP RLRSILVTHN VEYPATAKKS QLVELVEQHI LPLAPKLRAQ  60
   61 RARAKRSSMG IVNAGSAEDN GTWDDYDLAP PSTIKKRSKS PRKTSSRIKT EHDVLATPAP 120
  121 RSPTKRSTRS VSRALSHTDE PDYYEAPRSV RQPRREITPQ IKQESSEEEE EEEEEEEETI 180
  181 LPDHEESVFT YDNPFQSGSS PAQHKTPTNR RRTADRDSIR SAKSSSRLRT SIYNDDYQQV 240
  241 HEPQTPVYRQ PTPDIVEAGE EFTPNEQLEL EEAASRGEMA VEPRKPVGQV SRKGGFKAPL 300
  301 LVLFLSLFGA YLAWYRQEKI AVGYCEVGGE AKSLISPDVP IPEALLPFVE PQCEPCPSHA 360
  361 YCYEDYSVRC EHGFLLKPHP LSLGGLVPVP PTCEPDGEKA RRVKAVADKA IEELRERRAQ 420
  421 YECGELIAED GQKQDSPAIA EHELKETVSR KRSQRLTEEE FDELWAEAIG EVATREEVEI 480
  481 IGTEPSSDSS DLPDRQLSST SLARLPLTCA LKRSLRLSLA RYRLTIGLLI SAILGIFYMR 540
  541 ARYRKHVATK AQVPALVDIV LERLANQKEL GEEGIDDPWL FLPNLRDDVL RNIHSLSERE 600
  601 RIWQRVRAVV EQNSNVRTSQ REGRSGEVGR AWEWIGPVAG EGARRRRGGR VSLGPGLHTD 660
  661 SPDASKVTPE VKKWEESRPL Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle