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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GRC3_GIBZE
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNKKRRID EKPMSALSAL QARRREAAAS PVQTTQTGSE SDEKSVTTSV NPYQLLRKDS  60
   61 SQSTAPKTPK KNVVKDQYLP RGAESPASRS RGVVIASGNT DTLNPELAGA SQKVVREYSS 120
  121 FRLSKQNHRV KTGGVVELNL SNSERFLVLG SFGIRVIQGE VSLAGATLYP SETIEWVHAP 180
  181 HCHAVPMLRT IDETILELHP DRNARGIRQL GRLSPLFRKI WNESPETNSS KTSKESTFEI 240
  241 IYTSEDAPKK CIIQKLVSPP EWNKKLSSLV ATSRKKPSLS TLICGPKSAG KSTFSRLFLN 300
  301 GLLTDRSQKQ GARSVVILDL DPGQPEYAPP GTLSLVFVTK PNLGTPFTHP SLKNSAFTVV 360
  361 RSHSMASATP APNPDLYLAC ATDLFDTYSK HYSGAPLIVN TPGWIQGTGL DLLSSLIEKI 420
  421 KPQEVLYMSE AGPDEAVNAL RAATKLMFTE LPSQPSEFTS RTAAHLRAMQ TMSYFHLQNT 480
  481 ALKTSNLLDT STRLKWDASP LSSRAPLLVQ YSSSKRGVLG LLSYDYQCSP ELLADTVNGL 540
  541 VLAAVEIEDR KAFSNFPQEV APPPLVSTSP ENIPFIPNYD DVALDPRYSR TIGLVLLRGI 600
  601 DTKSETLQLV TPIPLEEFRS IKSQGRSIVL LHGKFDTPNW AYTEELYERA GTEEGNDMVL 660
  661 EVTEEDTEDD QSGVEPEGAD GVSDLTEVPW VEVLKGSQRR PVGSQVWRPL RHLGRNNTGD 720
  721 YEVKVGEEKD LSVYIDTNID AIRDEPNGYL ARTSRTNSPT MTDVALTLLV VLVLTQPGSD 780
  781 LCSARRMGKG DLININ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle