YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42546472, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRQPIRSVH APARAFGQSA RQAAWNGAWS RHFTSQSGNQ TGRQVWRWKT GTLPWEGVMA  60
   61 RLKNTRFTPG TTTPSMLQGV LRRGFRFTTK RKTNKGPTVG KTDEAKGLSA RLRKLTKEYG 120
  121 WVTVGVYLGL SVLDFPFCFL FVRMVGPEKI GEVEHRVMST VKQMIPDSVR EAWHTYWQSF 180
  181 RKAEAKALGD DEISDKMEMA TWGVEKAQER NRVDASLATQ LALAYAIHKS FIFIRVPLTA 240
  241 AVTPKAVKVL RSWGWNIGKK KA

Type	Start	End	Confidence
Cytoplasmic	1	118	0.51
Transmembrane Helix	119	138	0.53
Non-Cytoplasmic	139	262	0.88