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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46137743, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFYSAGAI ALLASTGLVS AQVSPYSISS TDAIKKSAKQ LAADLIEYYH GNDPGGIPGI  60
   61 LPGPPPNGDY YWWEGGAMWG TYMDYWRCTG DTKYNDLVMQ GMQFQVGDDQ DYQPSNVTLS 120
  121 LGNDDQGFWG MSAMLAAELA FPNPPSDQPG WLALAQAVFN TQANPDRHDD TCGGGLRWQI 180
  181 PRTNNGYDYK NSIANGCFFN LGARLARYTG NKTYADWAEK TWDWMEGVGF LDPTSYKIYD 240
  241 GGHVGKNCTD INKAQFSYNS GVFLQGAAFM YNHTDGEQKW EQRLDKLVDA TISNFFPKDI 300
  301 AVEIACENHD TCTTDMYSFK GYVHRWMSQA THLAPFIRPK ILPVLEKSAQ AAIAQCTGGD 360
  361 TGRVCGFKWA SGKYDGKTGA GQQMNVLAAV SSLLMENTPP PVTAKKGGTS KGNPNAGNVG 420
  421 DGKIDKTYGP LTTADKAGAG ILTFLVLSFA CGMFGWMSLG K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle