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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42546354, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPVVYEETP FADYLKGEEA PSRPCRSHGI FPFSSQRSDI VQDEGDESQA DWAPGIITPE  60
   61 PESSAGRSSP SPPSSPSPFA PTGRPLVKPR FRNKAPNALQ LKVPQQSGLR SASGKYSAAV 120
  121 AASIDRADNA KFLEQFRYTI IASQLLSGHS GLGQSQLGGG GPSPSPNNSD SLLSTEGIIA 180
  181 SVLAALAVAV VLSWVLGSGV SKKRLIFLLL LCAAAALLGQ IYMKRQWLRY RRSQSLSEIT 240
  241 SFVEHSHNFD SATGAALSLI QEVELVSRGY RLSAPLPPIS RIEDRTQTRR CVRLRKALRH 300
  301 SFAEVLASYN QVCTVVNGFA EQTDLEKYYD IYDITDFDMS DARRGLTDED LEDPESLRTL 360
  361 KILAARFSTI RKLFLCALLA LDADSDTNDL LRWTTAVESL LSLNHSTQAA HSRVQGILSE 420
  421 EDNFPSPPTP MNALTPGRER WRAQLRKLGS LSTGIRGLQA KLQLLREESD RSLNDSSDIS 480
  481 ELGPNLMSQY ESIGIDLKEL MSAWEEGKAA LALGIDRNEK RLSSMSTLLS PVSSLSGLTT 540
  541 VDENGGAAAA LKALTGESPP SSEYAGSTEQ DSPEVFEAVA LPRPRSMLTR EERIAKVREE 600
  601 REQKVIARQH VDATKGMLRE LETVINLRPR TRASAPAARI PSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle