YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42546347, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAFVVKLWE DIFTPGPTPT ILKAANASFA ALQTVLFCLL LATYNIHCVI LSVLCGGLWW  60
   61 SVNWFAAELA IAQREQREKE EREKQEQLAK EALGNEDNDD TETEVEKPIP NKAPPMVSDV 120
  121 AAAGLEPIES KGVVKQRGGT TGTQSSVSTE DEWEKVSEAE NEKDKDK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.62
Transmembrane Helix	21	43	0.70
Non-Cytoplasmic	44	45	0.44
Transmembrane Helix	46	67	0.80
Cytoplasmic	68	167	0.66