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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46110619, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFLAYLLL AITNGFALTS AAASGYHEQL TLRPLPLSQL LASFNFRANT SIADFEAHNF  60
   61 RLFPRSLAQI LQYAGTRELH LRFTLGRWDA QSWGARPWDG TREGGTGVEL WAWLDAETDA 120
  121 EADEKWLILT NALSGLFCAS LNFIDETRTI RPVMSFQPDG HHSNSSLANT RLLHGVLPHE 180
  181 VVCTENLTPF LKLLPCKGKA GIATLLDGHK LFDASYQSMA IDVRPKCDTD GECFLEMEET 240
  241 VDMVLDINRS KRPQNNPIPR PPPSHELLCD TSKPYHSDNT CFPADSLDGQ DWSLSQVFGR 300
  301 SIKGTCPLTD PDIPPVCVQI PQSRDIYTTE GAREIRSQDG NSRCYNLDAN SELALMLVKP 360
  361 ESQDEDKILN KPETPLLYAD RSFNGHGQEH GGVQAILSNP SDTDVEFVYM ESLPWFMRIY 420
  421 LHTLSARIAD APLSNSSDLI KEIYYRPALD RARGTQLELR MRIPPHCTVF LTYDFEKSIL 480
  481 RYTEYPPDAN RGFDIAAAVI TTLEPKVLNI RTTTLLLYLP TPDFSMPYNV IIFTSTAIAL 540
  541 AFGGLYNILV RRFVGADEAQ GMALKAKIIG LIARLKGKVG KQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle