YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46109032, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSGEAWLFL LSVLINAVNL FLQVFFTIMY SDLECDYINP IDLCNRLNTY IIPEAAVHGF  60
   61 LTFLFLINGY WVPLILNLPL LGWNVKKIVD NTHLLDATEI FRKLNVHKKE SFFKLGFHLI 120
  121 MFFFYLYSMI VALIRDESS

Type	Start	End	Confidence
Cytoplasmic	1	6	0.91
Transmembrane Helix	7	29	0.91
Non-Cytoplasmic	30	55	0.89
Transmembrane Helix	56	78	0.83
Cytoplasmic	79	111	0.89
Transmembrane Helix	112	134	0.90
Non-Cytoplasmic	135	139	0.89