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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46110110, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDRSARQSP HRSSSALAPA NYSSDTASVR PRNRRLASTL GDDSDTATSR EASRSRRGRN  60
   61 LEVHDTAASP SPARSYGLLS ALSPTNSRST SPLPSDRGGA TPQRTNSAAN LTNFFNDSLT 120
  121 QSWASIQGFT SSLISGDNGA ARRSQSHNRA GSRPGTWGRE FSSNGSSKKT GGAWGPAPPR 180
  181 EPNLNDVGAG SREEREAALK AAKRAMVLES HDGVNGGLDV SGKHKRRNSD ESVQEQPQPE 240
  241 EYMVYIHKVE PNDTYAGLIL KYQCREDAFR KANGLWTRDS VQVRKRLMIP VDACDIRGRP 300
  301 CDPPSWHNAH GVDLLAPTPS AEDNASTVHD DFFSRPTNGT PSATQPTEEE NPWTHVRWVK 360
  361 IDSFPQPIEI ARVARNAMGY FPPRRKKSIR TISTLSTPRQ SLDLYSNPPG SAGNLSRRRS 420
  421 SLGHRPQLSN TVMSSPVRGG GTISEAGESL PAWMRRPGGV GSMGMSTRAP GPDKDYLTTW 480
  481 TKKHLPGLTL EGIPSMSIMG SETAHFGFKS GESSSIVENP TGEGQDASST QQGNGLDKAA 540
  541 AAVETWLRGA LARKPSSQLD RIRGLPEGRP ERNGDLIELT DTGSDDGGPS TGVPSGLMES 600
  601 LQITSSGRSE PEGGVRGSIM INCCKMSKSK FKTFVYPSLK MPICIECRHP VKTLWTAYSG 660
  661 AGDKASGHNI RLTVYRHLLY NTLMRDDDRL DPSIIRLGIL LLLFDVYLTW ARLEKQTVPD 720
  721 ALPGASNLGK LAQQPIVLQY LFFLIFCALS TAAFHVSIRF LTSSAFSPLN LLGILPQYTR 780
  781 PNSVSTALLV SSSTKLFPIL LVIWDYDVPA SARSLGWAVV ANNVEALRIL LDCGYITACF 840
  841 LAIAGAASRW IVGRGVLLAA GLADVDSIGE SGVAADGKAL WALLMYAGEW AGRLAVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle