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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46109552, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLRGTKYL TCFYCGKRSN TKYDGITRQF LCLSCDATNY LDHNGEITDP PVATEREAPA  60
   61 TLYANPRPSS PSLPQDSIFC KTCLKNQRLF TSSLAQYLPD DPSHPEYAEL ERNYYRYRKG 120
  121 LEERYPQVCD ECAVRVDGQI KRAGYTAKTD HLRRMMEKSR GRKSTSDRSS ALNWLDSLGR 180
  181 ALWWGGLTMQ MFWHLRAVTF ALQHQDVGMY DPDDQSWSVM AVTGLSQAVD FLPPADFLIN 240
  241 TAVLASILSA WWNPQFVQVG LIVFFRFLFR RVLEMDGGHA QSRNAQLSAH LVMSAVMVMI 300
  301 YSSAKRSIKV DTTPLFGSSA DTASSPKQPK LTRVKREEPK TFSDLLNEAL DSPTQAPQTD 360
  361 RSQRSYASSF SPQRYVPSSP LRPTESPFNR FNSLNITPQR TQEVGASDEM DWTPTESQIK 420
  421 PQSQFRAFQD SPITNGPRRP FGESPVNNNP SPFWYKVPVA PTTPAQRLRN PPNAPIIRSK 480
  481 PVEQESIFFR GAARKKDENE TEEREVSFKP PSFFAPQESH DEANGLADLL SQSFSLGQEY 540
  541 SESDQGSVTR PSSSHAPGSP QFGRLGVEFI TIAVLLVLWG LTAAFPLPFG REVQLALLSA 600
  601 AGIIALRVTG EAGQEPGDRR GPSAATYVSS ALSVFELTAV CWLGWETWQG NTEGGKYGVG 660
  661 VLTAMLGHQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle