YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46109320, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQLALPRL VQRRLAAVLK TRTVTLRPAQ RRWLTPAPKP GDGPMMSRRA DRELPDISDV  60
   61 TFRWRRTFPI FLLIVAASSV AIFNYQKMSS PVVSSTLYAL RTNSEARALL GDEIYFRHQI 120
  121 PWIHGEMNQL HGRIDIWFSV RGTKGEGVMR FASNRPTSKG FFSTTEWSLT MEDGTRLDLL 180
  181 DSGDPFRALV GGGGDDLPPP VEEDAPTRGF RKQVEYK

Type	Start	End	Confidence
Cytoplasmic	1	66	0.87
Transmembrane Helix	67	85	0.86
Non-Cytoplasmic	86	217	0.96