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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42545181, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRETGSKR HKPNQTKPKR RAKISVLSLT SARTQATGSA RKTFPMNLMR LKKLWQPHQD  60
   61 SCLRCRLPKD HPSLPDVNCI RIHRYFELEI NWLWYIHIDI DVEGKVNNKP GYKPSNKLSC 120
  121 WKIHRPVLYR SQPNINTHPL QAHNLGTAPH TKLHFPLPHS RALKHNCDFK LPQTTKHNPP 180
  181 SKTDIPTDIM PPKKWDEEES EDSSSSAAPA VGAAAIAARR KFDDEEDEGD VLDSWDADDS 240
  241 EAEREKERKA TEAKQKAAAA AAAAKKPKGL RIAQHQAERA QQKAEAEESD EYEETEGEKR 300
  301 ERLRRTEQEA DLAHAADMFG DIGISANRSK ARPATVVVDA NDPTKTVDIS KLPLFQPKTK 360
  361 LQFETLRTSI APLISANAKS AHYSLFLQDF TKALAKDMNS EQIKKLASSM TALGNEKMRE 420
  421 EKAADKGGKK SKAAKTKTSL VTGRANVADT TTYDDNDDFG DNTRRRPLAP GSDPPLPAST 480
  481 CTLPPPSNCL PTRHAVDAKM TIKSRGVASQ PSRLLEGRSR GVWRRCSVRE RQHACKSGQC 540
  541 PKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle