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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46111665, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLIRRATRV APSKPPLQLP LDEKRDSKHN KAVDNRMAFF RRPLRLKGNS TISVPLGVVI  60
   61 FFPMLVLILI FILFVSHPSS PGRGFLIPGG AAPKMRKISE KYDKVFVEGC AQPDTSKPRA 120
  121 NAAFVILARN KELDGVLQSI KSVERHFNRW YNYPYVFLND GDFDENFKEA IRNHTSGEVE 180
  181 FGKVGPDMWG FPDWIDPKVV KEGIAKQGDA AVMYGGLESY HKMCRFYSGF FFNHPLLLKY 240
  241 EWYWRVEPEI SYFCDITYDP FQKMIEHNKT YGFTIAVKEL RETVPNIFRY ASAYKRLNNI 300
  301 TSKGLWEMFV EPPEDEEEDS PKESDTSPND NSFWDTLTGK KKNTIDPESM EGEAYNMCHF 360
  361 WSNFEIAKLS WFRSKEYQDF FEMMDRSGGF WMERWGDAPI HSLAAGALLG PQDIHYFRDF 420
  421 GYRHTTIQHC PANAPGKQLA REPYLEKTTF PEYKRFEEDD YWEQWDDVQE GGIGCRCRCD 480
  481 TDVVDVEGKE GSCLAEWVDV AGGWAHPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle