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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42545074, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLLSPTAL HPALGSPRDR DDNGYSTMTL SPASIPLPLP SPSPLKKTTF ADSLTLTSDS  60
   61 FQSQTEPDFE QHATDPLKPQ PSLEDSTSTS ASTSTLSSAQ AQDQQKDTTL LSSSSLAASP 120
  121 SSLPPSTSDQ TASWASSQYQ AHRSNSGPRV SASVIRHHKP DALSLALPPS SSKMISTEAS 180
  181 ESDSQSHSQT ASAAVPGLSS VLDNSSSATP SQSLTDALND LAKSRLPTAG LTPTTARTYT 240
  241 SATSNDTAAS DAAATILAST LQSPCFYHQR FADAVDIGKV LEEIKNDVSM SHSRLVATAT 300
  301 GVREVSKQLQ RRPIKRAVRN IMIVTKARDN QLVYLTRELA GWLLRTPRYG SDLGVNVYVD 360
  361 AKLRNSRRFD ASGLLAENPR FQHMLKYWTP DLCWSQPEKF DLVLTLGGDG TVLFTSWLFQ 420
  421 RIVPPVLSFS LGSLGFMTTF EFEKYKEHLN RIMGDDGMKI NLRMRFTCTV QRNNRGAGAL 480
  481 DAPKLEEPEQ FEVLNELVID RGPSPYVSNL ELYGDDELLT VVQADGCIFS TPTGSTAYSL 540
  541 SAGGALVHPD IPAILLTPIC PHTLSFRPMV LSDTMALRVV VPRNSRATAY CAFDGKGRLE 600
  601 LRQGDCVTIT ASQYPFPTVT RTDTEWFDSV SRTLRWNVRA AAQKPFDADV AEDGKDDEEI 660
  661 GWDIDTDSAC YASEDGSIRP PLLIKGGPAK DNSSMMASRS ATQSLILPNS GSIYFMYPKP 720
  721 TRNIFLLENS DYRIQEYPSF TVLSLAYQGK QAKQAKQSNQ TNTVSHANTA NPANTASHAD 780
  781 TAKHGDHAEF RYLADSMLRY AHALGTDDEW IAFMDFTTAF RTRYNSASYD MRTDCIPLNM 840
  841 SICITRLYAL VTSDHTITGN AEKDDHIGLD FLILMAARME PTFDHNGSDC EQYWTLKFIE 900
  901 TARRAAKGAT YEANISMKLL SNRSMRIDHD PPCNIARTSV KKPKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle