YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46108032, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYYTLVFM LLVFEMGMFV LLIFPMPFGV RRKIFTFISE NPVVAKIQYW MKITFIFILI  60
   61 LFVDSVNRVY RVQLELAAAS EQAKHGGGAA VMGHERLEVQ ARKFYSQRNM YLCGFTLFLS 120
  121 LILNRTYVMI IEVMRLEDKV RSYEGTKDNT KEAEKLAAAG KPGELARLRK ELELKEQDLK 180
  181 TLKKQSEQLH KSYDELSDKY AATQQTGEGR KGI

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.67
Transmembrane Helix	7	29	0.92
Cytoplasmic	30	48	0.67
Transmembrane Helix	49	66	0.82
Non-Cytoplasmic	67	109	0.63
Transmembrane Helix	110	129	0.63
Cytoplasmic	130	213	0.54