YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46108302, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFIDYSKT TKSKNYHGSG SFATFMIIAP VCFFLGILFA SFPYDFPLLW TKAPVPDNFF  60
   61 DHLETHLKFV HQSPALISRI LHIVISIGFI GFFIKLFRPS EANFLFDGAS LILYLIGFGV 120
  121 YVANIVKALR SVSAEIWTND GFDGKTHEGE SGELILGRED SLKVLSASNT ILALVLVGIL 180
  181 VLQAGEWYAE KKEADDVRAM EAKEAAEKKE GSPSKASNKK KQ

Type	Start	End	Confidence
Cytoplasmic	1	20	0.90
Transmembrane Helix	21	41	0.96
Non-Cytoplasmic	42	74	0.94
Transmembrane Helix	75	97	0.88
Cytoplasmic	98	103	0.89
Transmembrane Helix	104	125	0.87
Non-Cytoplasmic	126	163	0.90
Transmembrane Helix	164	184	0.73
Cytoplasmic	185	222	0.79