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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46108248, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPLNFTPW RRRALSTASQ RDNEQAQLPR EEPSTSPPQH GHSPNLPIAR PSSTSSAAGH  60
   61 REPIRSFIHG SMRDSLAPID SIQNARSVRQ DTAELATYLL SDPKTQQNSS VLQRARVSYQ 120
  121 DSIDSEAVDD SSIAENGRSS KTILEVPEPP SPDGNEDDLD ADAGPSVLAN LLKRSPPQSI 180
  181 APDRSNEQHG DDHVEDNQAE QDPRRTSHAE DATEQTPLLA RMTSGGRRSY SDLEGQKAQS 240
  241 KPSWFSGFVE VGHRMEERIS VAVNPKKWDR QALWNNVVLT PTSCLPAVSV GLLLNILDAL 300
  301 SYGMILFPLG KPIFSHLGSA GISVFYVSTI VSQITFSSGS IFKGAVGSEL IEVVPFFHNM 360
  361 AGKITEVVGE ENPDAVIATT IVSFSVSAMM TGLVFYLMGR FKVGYMVGFI PRHILIGCIG 420
  421 GVGWFLIATG FEVSARLDGS LQYNLDTLKQ LSDPATVPLW VVPLVLAIIL FYGQSKITSK 480
  481 FFLPLFILAI PLIFYFFVLA LDTLHIDTLR DHGWIFEGPP SGEPWWYFYT LYKFHLVRWD 540
  541 AVIECVPAML ALTFFGILHV PINVPALALN CGEDHADLDK ELRLHGYSNF LSGCFGSIQN 600
  601 YLVYANTVFF MRSGGNSRLA GYMLAAATFG IMVIGPSLIG YIPVMMVGTL IYDLGFELLL 660
  661 EALWLPRKKL KLAEYLTVVV IVLVMGIHDF VVGIGVGILL AFVSLILQTS RVSAIRGNYS 720
  721 GDIVTSTVRR NPSQQRYLHE VGRQIYIAKL TGYLFFGTIV SVEERIRALL EDSAFTAQPI 780
  781 KFLILDMWHV TGLDYSAGEA FNTISRLLDN KDVVLVLSGV DSETQLGRNL RAVGLGNDGI 840
  841 EVMMLPNLNS ALESCENELL KTLYARQKEI NSLRRISAQS AQNLDVPSNK SSGFSSFDPP 900
  901 FNSPRRNHLA EAARDTLSSI DVQNPKKWQS FKEPLRLMLQ VFQGLSDKNE DFWFPATSYF 960
  961 SRREIPAGTV LFRRGEQANG FYLVERGIMR AEYDLPQGWL CESIVAGTTL GELPFFSETD1020
 1021 RTATAVVERD CVIWLMDRDQ WARIQKKEPE IGRELLKISL KLTSERMSAI TSYILTTAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle