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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46136861, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEHLERE SVPEWNLHNL DYNSIKHEIK MHTTRDQATA MAIPGQTDEA LSRFEDGLYM  60
   61 ELGRQHERLQ LFVSSKADEI SRRLEYLAKN INRWASKNRD GLADDSAIKH QRRFTKYERE 120
  121 LVRCGSDIHA LERFVNAQAV AFRKITKKYK KWTGSTTLAT RLYENILSDP KSFTRRDFSS 180
  181 LQQRYDNITC TLNAAAPVLS EPSSPESASH SYRRQSLSGS INSAHRHCAN RSQPTFEFLP 240
  241 PAQIEEPVKY WNEYDNGSEC ADDDGAYAIY INPGESTNFP GFDYLHGIFT VPLNKAKGWF 300
  301 KHSKPGERQS LLGANHSSYQ YSSTVFNSSE SDEEAGYASS DGFPASGYAT HYALPSLSQQ 360
  361 QAHLYREKAL FWGTVGSFAV SFLLILVAGT LISTGRHKLR AEVDAGVTVG VVASLFTSCS 420
  421 ALGMTLYRHD QLSLPHLMAV WTTFIASCIL NGMLLILVVG NSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle