YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11066048
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 THTEDERSPG LLGLAVPCCV CLEAERLRGC LNSEKICIVP ILACLVSLCL CIAGLKWVFV  60
   61 DKIFEYDSPT HLDPGGLGQD PVISLDPTAA PAILVSSEAY TSPVSKAQSE AGAHVTVQGD 120
  121 HAAVASEPSA VPTRKNRLSA FPPFHSTAPP FPSPARTPEV RTPKSGTQPQ TTETNLQTAP 180
  181 KLSTSTSTTG TSHLIKCAEK EKTFCVNGGE CFTVKDLSNP SRYLCKCPNE FTGDRCQNYV 240
  241 MASFYSTSTP FLSLPE

Type	Start	End	Confidence
Cytoplasmic	1	35	0.82
Transmembrane Helix	36	59	0.83
Non-Cytoplasmic	60	256	0.93