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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37958135
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVMAPRTLL LLFSGALFLT QTRAGSHSLR YFHTAVSRPG RGEPRYIIVG YVDDTQFVRF  60
   61 DSDAAIPRME PRAAWMEQEG PEYWDRETRI SKDNTQTYRV GLQILRGYYN QSEAGSHTVQ 120
  121 WMYGCDLGPD GRLLRGYDQH AYDGKDYIAL NEDLRSWTAA DTAAQITQRK WEAANAAEQD 180
  181 RAYLEGRCLE WLRRYLENGK ETLQRAEPPK THVSHHPISD HEATLRCWAL GFYPAEITLT 240
  241 WHRDGEDQTQ DMELVETRPA GDGNFQKWAA VVVPSGEEQR YTCHVQHEGL PEPVTLRWEP 300
  301 SSQPTIPIVG IVAGLVVLGA VVTGAVFAAV MWRKKSSDKK GGSYSQAANS DSAQGSDVSL 360
  361 TACKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle