YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27658023
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERNTRRAKGH AQTSREGLNT LRGYYNQSES GSHTYQEMYG CDVGSDRRLL RGYIQFAYDG  60
   61 ADYIALNEDL RSWTAADAAA QISRRKWEAA GVAEQERNYL EGECVEWLLR YLENGKETLQ 120
  121 RADPPKTHVT HHPISDHEVT LRCWALGFYP AEITLTWQRD GEDLTQDTEF VATRPAGDGT 180
  181 FQKWAAVVVP SGEEQRYTCH VQHEGLPEPV TRRWEPPPQS IILIVGVLAG LVLLGAVVAG 240
  241 AVIWRKKRSG EKRGIYVQAA NSDSAQGSDA SL

Type	Start	End	Confidence
Non-Cytoplasmic	1	220	0.97
Transmembrane Helix	221	244	0.95
Cytoplasmic	245	272	0.97