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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0305421, olf...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHPRKAVAT PATLQLGPPA QTAQSPAATL RHSRTASSSR RLSLIRCFIS CHTFNLFLLL  60
   61 LLLASGVRAA SKLATRSNKT SGSSTASGVG AGTAATSAAA AAASGTPIWD HAIDLNDDFR 120
  121 ILWQIINQDI TFEIQARTLG YVGFGFSPDG NLAGADMAIG WVDKGQTYFQ DRHVTRNGDP 180
  181 EPVVDPSQDY MLMLGYENAT HTVLRFRRKL DTCDPSHDIA ITNDTMRLLY MYHAQDPPHG 240
  241 SVRPGTLPDP ARAFRPYRPM VLMQRAQLPM PSPTHDERVR VLELRNEDVE LPAGDLPLFW 300
  301 CKMFKLEDIN RKHHLIRYEP IYDSSSSVHY LQHITLHECQ GAHAELEEMA REQGRPCLGA 360
  361 RSIPLACNAI VASWSRGSEG FTYPHEAGYP IESRQAKYYL METHYNNLKP DFAQLHARQM 420
  421 ADNSGLKIYF THVLRPNDAG TLSIGMDPNW RHIIPPGQKR VVSEGQCIED CTGYAFPQQG 480
  481 INIFAVMMRT HQIGKEVKLR QIRQTEELPP IAHDSNIDVA YQDFRRLPQS VHSMPGDRLI 540
  541 AECIYDSSSR KAITLGGLTM KEESCTVLTL YYPRQKKLTT CHSLPSLPTV LHSLGIEQLA 600
  601 TDSNPVLISS PPELAGMTLE ARLISYDWEN QFGEFQEATR KGSFKPICWG AKNHVVPGSE 660
  661 FLEGYSINVT KTYKKHRRCK PKRPLAPPTE RTAPPPASDL SELPVLHELD NNNIIEGAAR 720
  721 SSRSSATDVH SLSRGSGRHF ISCLLWLGAS SWWLLLMLRT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle