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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23619599, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNTLISFF SFVCLFFRVL SCEGIHEKKK INLKIELIDK DVLLSDDHLK KEKVIMQDGR  60
   61 KIKIKNFERI KENVLERAII VKELDKLKYI NTKKEAITLE TLDDDNDDDE NNEVSSNDEN 120
  121 NNDENNSNEN NSNENNSNEN NSNENNIDDS QQVDEEQHNM KVISSEESVE NDIHMLRKVY 180
  181 QRDSENGSTT YCYMRYTFNF NLEKLNENSR SQLFKGLDKT LDYLSFLPKN EDVTDTESIL 240
  241 DNEYKMLDNT LGDTDPIVSN VELKNYNFDI ISTSEYADTI DEIINFLNTR KDQLNISTSL 300
  301 KYKLMEAKNN LNKYNNKDML VNNPRDSNLY LYEWLQHLNK AFLEKKKALE LLNDTKDIKE 360
  361 NYNDKLFANS VEQLFYCYNL FDVSNDSVDS FFLNNMGNKK ESEEVNINIH KPLSRELLSK 420
  421 NIDDNADDEL TKCKSFLSLI TPNELFLNDD LGISHNDMEK ADIDMNQEED EDEEYENNKN 480
  481 NDMLLNNLNV QNRDKLVKSM GEEDGVEDSK NYEMNNNEMD SLDVSSLRKN KSYLENKEAF 540
  541 SQLTQEIKND EMTEDYDYSY DIDSEEENKE GTYEDSDEDS EEENKEGTYE DSDEESDEES 600
  601 DEESDEESDE ESDEESDEES DEESDEESDE ESDEESDDEI DEESDEESDE ECDEESDDEI 660
  661 DEESDEESDE ESDEESDEES DEEFDEENDY DNDDDNDDDS DEEFDEEDDY DNDEENDYYN 720
  721 DEDDEESDEE LDEEVYDNDY ENLHYKGKDN YSNYSLKSAL SDLAKSGTNH LIDKATNSIS 780
  781 SALKKNFNKK KITDKSNKLF DKISKGLNNS KKIINKTKKD IKKGINKGAK LIKDTKKDVK 840
  841 KHVKNTKEKG KNLTRKAKKV VKKGNDIVKE NAQIGLNKVK KGTKNGINKV KKGAKNGINK 900
  901 VKKGTKSGIN KVKEGAKNGI NKVKKGTKNG INKVKEGAKN GINKVKKGTK NGINKVKEGT 960
  961 KDGINKVKEG TKNGINKVKE GTKNGINKVK DGAENGINIV KEGVNNGKNK IKEGSKDGIN1020
 1021 KLKNEVDKGV NKVKEYAQNG VNQVKNGTIN ALEDAIKEIS KPTGNLRFKE KESINKVNTS1080
 1081 PNKVTNKKGK TPLNNTKSDE KKKSNGRKMS LISLTEVSNK KSLNKNKIKK EINKINKEYK1140
 1141 KLKKMENKMK KELNNPIPSD KKIISEFDDF EKSNEVKKNK NI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle