YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15080870, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.46
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLIIHIAV IVLPFVLMID VKRENSFFLR HSPKRLYKKA DYNNMYDKII KKQQNRIYDV  60
   61 SSQINQDNIN GQNISFNLTF PNYDTSIDIE DIKKILPHRY PFLLVDKVIY MQPNKTIIGL 120
  121 KQVSTNEPFF NGHFPQKQIM PGVLQIEALA QLAGILCLKS DDSQKNNLFL FAGVDGVRWK 180
  181 KPVLPGDTLT MQANLISFKS SLGIAKLSGV GYVNGKVVIN ISEMTFALSK

Type	Start	End	Confidence
Cytoplasmic	1	2	0.32
Transmembrane Helix	3	19	0.42
Non-Cytoplasmic	20	230	0.85