YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39752621
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYWRLLWLA LKMIYQLLCC SVSLIFFCFN VFWLFCNLAI PWCTLTLLVV CIASKFVKLQ  60
   61 RSPNEKRLLS LLSSPEEWPS YWPIANRAAG FDAPENSKAA IKKCLARGYR NVLLDAGLTS 120
  121 CGEIVVANPT KINVAQPLVE LQKLNITEQH PMGSQYEAET VAPLRQLSDF LEAEAAETTV 180
  181 FLRLHDNSAR MINELQKFMT ADESFTQRTI VISRSPLAIY QLRKLKPEII CGLWYETYLS 240
  241 LAILKSSTLI TSIYGAIFRN IIAPVIGVSV VFLSKDEINF HIADLWRNVG VRPIVYMVNS 300
  301 PNEKRYFQKT MKIQYLTDSL RSEPHLLMKA

Type	Start	End	Confidence
Cytoplasmic	1	12	0.83
Transmembrane Helix	13	33	0.91
Non-Cytoplasmic	34	37	0.77
Transmembrane Helix	38	59	0.89
Cytoplasmic	60	330	0.80