YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23272977
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRPPTRPGNM ERGPTVGAGL GAGTRVRALL GCLVKVLLWV ASALLYFGSE QAARLLGSPC  60
   61 LRRLYHAWLA AVVIFGPLLQ FHVNSRTIFA SHGNFFNIKF VNSAWGWTCT FLGGFVLLVV 120
  121 FLATRRVAVT ARHLSRLVVG AAVWRGAGRA FLLIEDLTGS CFEPLPQGLL LHELPDRKSC 180
  181 LAAGHQWRGY TVSSHTFLLT FCCLLMAEEA AVFAKYLAHG LPAGAPLRLV FLLNVLLLGL 240
  241 WNFLLLCTVI YFHQYTHKVV GAAVGTFAWY LTYGSWYHQP WSPGIPGHGL FPRSRSMRKH 300
  301 N

Type	Start	End	Confidence
Non-Cytoplasmic	1	25	0.79
Transmembrane Helix	26	48	0.78
Cytoplasmic	49	63	0.92
Transmembrane Helix	64	83	0.95
Non-Cytoplasmic	84	103	0.91
Transmembrane Helix	104	124	0.96
Cytoplasmic	125	193	0.61
Transmembrane Helix	194	217	0.79
Non-Cytoplasmic	218	226	0.47
Transmembrane Helix	227	252	0.83
Cytoplasmic	253	258	0.39
Transmembrane Helix	259	277	0.77
Non-Cytoplasmic	278	301	0.52