YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25244342
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTQMWTYIF VIYVILQSQS SASTCEWLGR YRIITTESLN LLKNMGGKYA DLETPFPSRL  60
   61 YTLMDKSKVE DQVKFLVLTL DHIIHLMDAR EHMNSVNWDQ NTVEDFLNIL HRKSSDLKEC 120
  121 VARYAKPAHK ESYEIRIKRH FRTLKKILKK KQYSAEAWEQ IRRVVKSHLQ RMDIIASNAR 180
  181 VNPRV

Type	Start	End	Confidence
Signal Peptide	1	22	0.85
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	185	0.98